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Creators/Authors contains: "Brent, D"

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  1. Tiny glue droplets along the viscous capture threads of spider orb webs prevent insects from escaping. Each droplet is formed of a protein core surrounded by a hygroscopic aqueous layer, which cause the droplet’s adhesion to change with humidity. As an insect struggles to escape the web, a thread’s viscoelastic core proteins extend, transferring adhesive forces to the thread’s support fibers. Maximum adhesive force is achieved when absorbed atmospheric moisture allows a flattened droplet to establish sufficient adhesive contact while maintaining the core protein cohesion necessary for force transfer. We examined the relationship between these droplet properties and adhesive force and the work of extending droplets at five relative humidities in twelve species that occupy habitats which have different humidities. A regression analysis that included both flattened droplet area and core protein elastic modulus described droplet adhesion, but the model was degraded when core protein area was substituted for droplet. Species from low humidity habitats expressed greater adhesion at lower humidities, whereas species from high humidity habitats expressed greater adhesion at high humidities. Our results suggest a general model of droplet adhesion with two adhesion peaks, one for low humidity species, which occurs when increasing droplet area and decreasing protein cohesion intersect, and another for high humidity species, which occurs when area and cohesion have diverged maximally. These dual peaks in adhesive force explain why some species from intermediate and high humidity habitats express high adhesion at several humidities. 
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  2. Introduction Orb web and cobweb weaving spiders in the superfamily Araneoidea are distinguished by their ability to make a chemically sticky aqueous glue in specialized aggregate silk glands. Aggregate glue is an environmentally responsive material that has evolved to perform optimally around the humidity at which a spider forages. Protein components and their post-translational modifications confer stickiness to the glue, but the identities of these proteins have not been described for orb web weavers. Methods Using biomechanics, gene expression data, and proteomics, we characterized the glue’s physical properties and molecular components in two congeners that live in different environments, Argiope argentata (dry southwest US) and Argiope trifasciata (humid southeast US). Results The droplets of A. argentata are less hygroscopic than those of A. trifasciata and have proportionately smaller viscoelastic protein cores, which incorporate a smaller percentage of absorbed water as humidity increases. Argiope argentata protein cores were many times stiffer and tougher than A. trifasciata protein cores. Each species’ glue included ~30 aggregate-expressed proteins, most of which were homologous between the two species, with high sequence identity. However, the relative contribution and number of gene family members of each homologous group differed. For instance, the aggregate spidroins (AgSp1 and AgSp2) accounted for nearly half of the detected glue composition in A. argentata , but only 38% in A. trifasciata . Additionally, AgSp1, which has highly negatively charged regions, was ~2X as abundant as the positively charged AgSp2 in A. argentata , but ~3X as abundant in A. trifasciata . As another example, A. argentata glue included 11 members of a newly discovered cysteine-rich gene family, versus 7 members in A. trifasciata . Discussion Cysteines form disulfide bonds that, combined with the higher potential for electrostatic interactions between AgSp1 and AgSp2, could contribute to the greater stiffness of A. argentata glue. The ability to selectively express different glue protein genes and/or to extrude their products at different rates provides a faster mechanism to evolve material properties than sequence evolution alone. 
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  3. A bstract We establish an orientifold Calabi-Yau threefold database for h 1 , 1 ( X ) ≤ 6 by considering non-trivial ℤ 2 divisor exchange involutions, using a toric Calabi-Yau database ( www.rossealtman.com/tcy ). We first determine the topology for each individual divisor (Hodge diamond), then identify and classify the proper involutions which are globally consistent across all disjoint phases of the Kähler cone for each unique geometry. Each of the proper involutions will result in an orientifold Calabi-Yau manifold. Then we clarify all possible fixed loci under the proper involution, thereby determining the locations of different types of O -planes. It is shown that under the proper involutions, one typically ends up with a system of O 3 /O 7-planes, and most of these will further admit naive Type IIB string vacua. The geometries with freely acting involutions are also determined. We further determine the splitting of the Hodge numbers into odd/even parity in the orbifold limit. The final result is a class of orientifold Calabi-Yau threefolds with non-trivial odd class cohomology ( $$ {h}_{-}^{1,1} $$ h − 1 , 1 ( X/σ * ) ≠ 0). 
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  4. Ultraviolet radiation (UVR) is a major environmental stressor for terrestrial plants. Here we investigated genetic responses to acute broadband UVR exposure in the highly desiccation-tolerant mosses Syntrichia caninervis and Syntrichia ruralis , using a comparative transcriptomics approach. We explored whether UVR protection is physiologically plastic and induced by UVR exposure, addressing the following questions: (1) What is the timeline of changes in the transcriptome with acute UVR exposure in these two species? (2) What genes are involved in the UVR response? and (3) How do the two species differ in their transcriptomic response to UVR? There were remarkable differences between the two species after 10 and 30 min of UVR exposure, including no overlap in significantly differentially abundant transcripts (DATs) after 10 min of UVR exposure and more than twice as many DATs for S. caninervis as there were for S. ruralis . Photosynthesis-related transcripts were involved in the response of S. ruralis to UVR, while membrane-related transcripts were indicated in the response of S. caninervis . In both species, transcripts involved in oxidative stress and those important for desiccation tolerance (such as late embryogenesis abundant genes and early light-inducible protein genes) were involved in response to UVR, suggesting possible roles in UVR tolerance and cross-talk with desiccation tolerance in these species. The results of this study suggest potential UVR-induced responses that may have roles outside of UVR tolerance, and that the response to URV is different in these two species, perhaps a reflection of adaptation to different environmental conditions. 
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  5. Abstract. Soil pore water (SPW) chemistry can vary substantially acrossmultiple scales in Arctic permafrost landscapes. The magnitude of thesevariations and their relationship to scale are critical considerations forunderstanding current controls on geochemical cycling and for predictingfuture changes. These aspects are especially important for Arctic changemodeling where accurate representation of sub-grid variability may benecessary to predict watershed-scale behaviors. Our research goal is tocharacterize intra- and inter-watershed soil water geochemical variations attwo contrasting locations in the Seward Peninsula of Alaska, USA. We thenattempt to identify the key factors controlling concentrations of importantpore water solutes in these systems. The SPW geochemistry of 18 locationsspanning two small Arctic catchments was examined for spatial variabilityand its dominant environmental controls. The primary environmental controlsconsidered were vegetation, soil moisture and/or redox condition, water–soilinteractions and hydrologic transport, and mineral solubility. The samplinglocations varied in terms of vegetation type and canopy height, presence orabsence of near-surface permafrost, soil moisture, and hillslope position.Vegetation was found to have a significant impact on SPW NO3-concentrations, associated with the localized presence of nitrogen-fixingalders and mineralization and nitrification of leaf litter from tall willowshrubs. The elevated NO3- concentrations were, however, frequentlyequipoised by increased microbial denitrification in regions with sufficientmoisture to support it. Vegetation also had an observable impact on soil-moisture-sensitive constituents, but the effect was less significant. Theredox conditions in both catchments were generally limited by Fe reduction,seemingly well-buffered by a cache of amorphous Fe hydroxides, with the mostreducing conditions found at sampling locations with the highest soilmoisture content. Non-redox-sensitive cations were affected by a widevariety of water–soil interactions that affect mineral solubility andtransport. Identification of the dominant controls on current SPWhydrogeochemistry allows for qualitative prediction of future geochemicaltrends in small Arctic catchments that are likely to experience warming andpermafrost thaw. As source areas for geochemical fluxes to the broaderArctic hydrologic system, geochemical processes occurring in theseenvironments are particularly important to understand and predict withregards to such environmental changes. 
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